EPCOT

Installation

  • Installation
    • EPCOT Installation
      • Environment Setup
      • Dependencies
      • Pretrained Models
      • Input Preparation
      • Colab Tutorial
      • TF Motif Analysis
    • EPCOTv2 Installation
      • Dependencies
      • Installation Steps
      • Clone the Space repository
      • Create and activate virtual environment
      • Install dependencies
      • Running Locally or in Colab
      • Usage Steps
      • Notes
      • References

Tutorials

  • Tutorials for using EPCOT
    • EPCOT: Predicting Human Genomic Modalities from ATAC-seq
      • Introduction
      • Prerequisites
      • Quickstart
      • Inputs & Outputs
      • Predicted Modalities
      • Notes
      • Reference
    • EPCOTv2: Predicting Human and Mouse Genomic Modalities from ATAC-seq
      • Introduction
      • Human Data Prediction
      • Mouse Data Prediction
EPCOT
  • Installation
  • View page source

Installation¶

  • EPCOT Installation
    • Environment Setup
    • Dependencies
    • Pretrained Models
    • Input Preparation
    • Colab Tutorial
    • TF Motif Analysis
  • EPCOTv2 Installation
    • Dependencies
    • Installation Steps
    • Clone the Space repository
    • Create and activate virtual environment
    • Install dependencies
    • Running Locally or in Colab
    • Usage Steps
    • Notes
    • References
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